Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944258.1_cds_XP_016487156.1_77924
CDS Infomation

[gene=LOC107807317] [db_xref=GeneID:107807317] [protein=proline iminopeptidase-like isoform X2] [protein_id=XP_016487156.1] [location=join(12974..13307,13831..13967,14068..14241,14498..14734,14869..14969,15058..15130,15983..16051,16195..16302,17430..17555,17807..17851)] [gbkey=CDS]
Sequence

ATGCGGGCACTTCATTCGTCATTGATAAAGCCACTCCTCCATCTTCACCTCCGATTCCCA
TTTTCTACTCCCATTTTTTCGCTCTCTCCACTTCGAACAAAATATCTCCACTCCCACTCC
TTCACTACTCCTTCACTCCCAAAACTAACTGCCACGGTCGCCAACAAGATGGCCGCCGTC
GACGGAAACTCCACGGCGGACCACATCGCCGGCGGTTGGTATTCCGCTCCCGACCTCCGA
TTGCGCGATCATCGATTTAACGTTCCTCTCAACTACTCTCTCGATCACTCTTCCTCCCCT
AAAATCTCCGTATTCGCTCGGGAAGTCGTTGCTGTTGGTAAGGAGGAACAACCTTTGCCA
TATCTGCTATATTTGCAAGGTGGACCGGGCTTTGAATGCCCAAGGCCAACTGAAGCTGGA
GGATGGATAAGCAGAGCATGCGAGGAGTACCGTGTAATCTTAATGGATCAGAGGGGAACA
GGTTTATCAACATCATTAACACCATCCTCTATGTCACAAGTGAAGTCCGCTGAGGATTTA
GTTAACTACTTGAGACATTTCCGAGCTGATAATATAGTACATGATGCTGAGTTCATCCGA
AAACGTCTTGTCCCTGGTGCTGGACCTTGGACAATACTTGGACAGAGCTTCGGAGGATTT
TGTGCCGTTACTTACTTGAGTTTTGCTCCCAAAGGACTCAAACACGTTCTTATAACCGGC
GGACTCCCTCCAATTGGAAAAGGATGCACAGCTGATGCTGTTTACAGGGCAGGCTTTGAG
CAGCTTGTTCATCAGAATGAAAAATATTACAAGAGGTTTCCACAGGATATTGAAATTGTT
CATGATGTCGTAAATTACCTGGCAGAATCTGAAGGAGGAGGGGTGCCTCTTCCATCTGGC
GGCATCTTAACACCTCGAGGACTACAACTTCTTGGTCTCTCGGGTCTAGGATCTAGTACT
GGTTTTGAACGGTTGCATTACCTGTTTGAGAGAGTCTGGGATCCTGTAATAGTTCAAGGA
GCAAAAAGGAGAATCAGTGACTACTTCTTGAATGCTTATGAGAGATGGATAGCATTTGAC
GCAAACCCTTTATATGCTCTTTTGCATGAAAGCATATATTGCCAGGGTGCCTCATCACTA
TGGTCTGCTCATAGAATTAGGGCTGAGAATGAGAACAAATTCGATGCAATTGAGGCAGCA
AAAGGCAGCCGCCCCGTACTTTTTACTGGAGAGATGATATTCCCATGGTTGTTTGATGAA
GTCCATGCCTTGAGGCCATTCAAAGATGCGGCCCAGCTATTAGCAGAGAAGAAGGATTGG
CCTTCATTATATGATATTGCTGCGTTAGAGGATAACAAGGAATCAGGCTTTGGATTACTA
ATGAGTACATGCACTCTGGTCTGA

Peptide Sequence

PEP ID

XP_016487156.1
PEP Infomation

PREDICTED: proline iminopeptidase-like isoform X2 [Nicotiana tabacum]
Sequence

MRALHSSLIKPLLHLHLRFPFSTPIFSLSPLRTKYLHSHSFTTPSLPKLTATVANKMAAV
DGNSTADHIAGGWYSAPDLRLRDHRFNVPLNYSLDHSSSPKISVFAREVVAVGKEEQPLP
YLLYLQGGPGFECPRPTEAGGWISRACEEYRVILMDQRGTGLSTSLTPSSMSQVKSAEDL
VNYLRHFRADNIVHDAEFIRKRLVPGAGPWTILGQSFGGFCAVTYLSFAPKGLKHVLITG
GLPPIGKGCTADAVYRAGFEQLVHQNEKYYKRFPQDIEIVHDVVNYLAESEGGGVPLPSG
GILTPRGLQLLGLSGLGSSTGFERLHYLFERVWDPVIVQGAKRRISDYFLNAYERWIAFD
ANPLYALLHESIYCQGASSLWSAHRIRAENENKFDAIEAAKGSRPVLFTGEMIFPWLFDE
VHALRPFKDAAQLLAEKKDWPSLYDIAALEDNKESGFGLLMSTCTLV

Transcript Sequence

Gene sequence data has not been registered.